Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFFHGVTVTNVDIGARTI-ALPA-----------------SSVIGLCD-VFTPGAQASAKPNVPVLLTSK-KDAAAAFGIGSSIYLACEAIYNRAQAVIVAVGVETAETPEAQASAVIGGISAAGERTG--------LQALLDGKSRFNAQPRLLVAPGHSAQQAVATAMDGLAE----KLRAIAILDGPNSTDEAAVAYAKNFGSK---RLFMVDPG---------VQVWDSATNAARNAPASAYAAGLFAWTDAEYGFWSSPSNKEIKGVTGTSRPVEFLDGDETCRAN---LLNNANIATIIRDDGYRLWGNRTLSSDSKWAFVTRVRTMDLVMDAILAGHKWAVDRGITKTYVKDVTEGLRAF-MRDLKNQGAVINFEVYADPDLNSASQLAQGKVYWNIRFTDVPPAENPNFRVEVTDQWLTEVLDVA |
| 3HXL Chain:A ((15-439)) | GVYINFKSEPQLGERGIVSMPLILSWGEPGKMITIEAGDDVFPKLGYSIMDAQLRLINEALKRAKTLLLYRLNAGTKAAVTVGNLTVTAKWGGARGNDITLVIQENIDDETKFDVSTLVDGAELDKQTVSDIAGLAANDWVIFSGTGALTETAGAPLINGSDGAVTNQAYIDYLAAVEIFDFNTIALPSTDDALKATFTAFAKRLRDDEGKKIQVVLENYPAADYEGVISVKNGVVLADGTILTAAQATAWVAGATAGARVNESLTYQGYDEAVDVAPRYTNAQIIAALQAGEFLFTASDNQALVEQ--DINTLTSFTADKGKQFAKNRVIRVLDGINNDFVRIFSKFYSN--NADGRNLLKSECINYMN-TLQDIDAIKNFDGQTDLTVQSDV----DAVYIEAYAWPVDSIEKIYVRVRIKL---------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3HXL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -11238 for 2622 contacts (-4.3/contact) +
2D Compatibility (PS) -36742 + (NN) 9479 + (LL) 1612
1D Compatibility (HY) 8800 + (ID) 1400
Total energy: -29489.0 ( -11.25 by residue)
QMean score : 0.053
|
|
|