Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIAGSMVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPNIIGIKEATGDLQRAKEVIERVGKDFLVYSGDDATAVELMLLGGKGNISVTANVAPRAMSDLCAAAMRGDAAAARAINDRLMPLHKALFIESNPIPVKWALHEMGLI-PEGIRLPLTWLSPRCHEPLRQAMRQTGVLA
1YXD Chain:A ((1-292))MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGIKEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMCKLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITDSGRETVRAALKHAGLL-


General information:
TITO was launched using:
RESULT:

Template: 1YXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -195355 for 2666 contacts (-73.3/contact) +
2D Compatibility (PS) -32402 + (NN) -21905 + (LL) 144
1D Compatibility (HY) -30000 + (ID) 8300
Total energy: -287818.0 ( -107.96 by residue)
QMean score : 0.600

(partial model without unconserved sides chains):
PDB file : Tito_1YXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YXD-query.scw
PDB file : Tito_Scwrl_1YXD.pdb: