Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKALKTLFIATALLGSAAGVQAADNFVGLTWGETSNNIQKSKSLNRNLNSPNLDKVIDNTGTWGIRAGQQ-FEQGRYYATYENISDTSS-----GNKLRQQNLLGSYDAFLPIGDNNTKLFGGATLGLVKLEQDGKGFKRDSDVGYAAGLQAGILQELSKNASIEGGYRYLRTNASTEMTPHGGNKLGSLDLHSSSQFYLGANYKF |
3QRA Chain:A ((3-157)) | ----------------------GESSISIGYAQSRVKEDGY-------------KLDKNPRGFNLKYRYEFNNDWGVIGSFAQTRRGFEESVLIDGDFKYYSVTAGPV--FRIN-EYVSLYGLLGAGHGKAKFSS-FGQSESRSKTSLAYGAGLQFNPHPNFVIDASYEYSKLDD-----------------VKVGTWMLGAGYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 36582 for 1125 contacts (32.5/contact) +
2D Compatibility (PS) -14032 + (NN) 4108 + (LL) 2832
1D Compatibility (HY) -3200 + (ID) 950
Total energy: 25340.0 ( 22.52 by residue)
QMean score : 0.078
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