Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLRNGVPSMTKDEKEKTHVDAIIERYKDLMVEIPPADRQPGLSLLWPVPAQPAIDKGVRQAENWLADQIEGQLWTAFAFGRDSLPTPMQKTAFEVAFLTRLQQRLVAARRSG |
1HQ1 Chain:A ((53-65)) | ------INSMTMKERAKPEIIKGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMK------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1HQ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3408 for 43 contacts (79.3/contact) +
2D Compatibility (PS) -1319 + (NN) -918 + (LL) 4204
1D Compatibility (HY) -800 + (ID) 250
Total energy: 4325.0 ( 100.58 by residue)
QMean score : 0.523
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