Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQIDLSDKLAIVSGSTAGIGFAIASGLAAAGATVVVNGRSQAA-VDRAIAAIRNGQPDARVRGVAGDLGTAEGCAAFVAAEPKA----DILVNNLGIFELKDFFDIEDAEWSRFFEVNVMSGVRLARAYVPGMVERGWGRVVFLSSESALNIPADMIHYGFSKTANLSVSRGLAKRLAGTGVTVNAVLPGPTLTEGVAEMLREDAQKAGQSIEEAGTAFVRQHRSSSIIQRLATPEEVANLVVYTCSTQASATTGAALRVDGGVLDSLA |
3W8F Chain:A ((2-256)) | ----LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLES-KFGVKAYYLNADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAPIEEFPVDKWNAIIALNLSAVFHGTAAALPIMQKQGWGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKGITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPS---LQFVTPEQLGGAAVFLSSAAADQMTGTTLSLDGGWTAR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3W8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -150667 for 2140 contacts (-70.4/contact) +
2D Compatibility (PS) -27103 + (NN) -9684 + (LL) 1032
1D Compatibility (HY) -11600 + (ID) 3950
Total energy: -201972.0 ( -94.38 by residue)
QMean score : 0.540
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