Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTLKLVQTLAGLLGEGESGKAEVLAVKEGLANNFQVLLKLTLANSGQSLVEVQSNRPLVPGNLLNVSATSNTSVVATLLDSMAGAGPLSSLDLEQLPPGTLLQGKVLSSTALPADKAQQVVYRVLLNLLNTPLAGSKLSLDSPQALPVGSLLTALVKNSQQIDFLPLSGRLDQLALGQQLAGQSARQASLEGLFAALQGLNGRNDLPDSLRQAVERLFAGLPEAQKMGDSKLLGQALQQSGLFLEARLMQGATDHLGHDLKANLLRLFAQLSPLPPTGAQAPGMFAGNTANLAQALPAFVRNALGNLGQSANKTQALNFPLPSKVLQLFDEDMELESLLRLAAAAISRLQTHQLSSLAQTSTLPDGTQLATWQMEVPMRHQHSVVPLQVKFQEEQRKTGEEARESLWRVELAFDLEPLGPLHAQATLLRGSLSSQLWAERDATARLVEHELGHLRQRLRDAGLTVGEITCQRGRPPQGPRATIEQRWVDETA |
2K5H Chain:A ((58-95)) | --------------------------------------LVKVDG---ETWRATSGTVLDVGEEVSVKAIEGVKLVVEKLEEQKGS----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K5H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17632 for 186 contacts (-94.8/contact) +
2D Compatibility (PS) -4154 + (NN) -8 + (LL) 30460
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 6716.0 ( 36.11 by residue)
QMean score : 0.562
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