Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------------------------MTAELGIFNGHLLQHL--LAALWFLFCWVGYTRYATWKGRDTACLASVLHLYREDWMRRLLLRDNRIADASVIGNLERNASFFA-SSTLIILAGILTLLGSTDRAVSVLADLPFVEEASRGLSELKLLCLAVVFVYA--------------FFTFSWCMRQYNFAAILVG-SAPMIGERNVGELERKSFAERA-------ARVISLAANQFNFGLRSYYF--GLAMLAWFINSWFFMLVTAGVVLVLYRREFHSDVL-EVMVYTETAIAESPR-------EGEGEV-PRG------ |
| 1NI3 Chain:A ((11-388)) | KVQWGRPGNNLKTGIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEAKVAVPDERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQVVRAFDDAEIIHVEGDVD-PIRDLSIIVDELLIKDAEFVEKHLEGLRK--ITSRGANTLEMKAKKEEQAIIEKVYQYLTETKQPIRKGDWSNREVEIINSLYLLTAKPVIYLVNMSERDFLRQKNKYLPKIKKWIDENSPGDTLIPMSVAFEERLTNFTEEEAIEECKKLNTKSMLPKIIVTGYNAL--NLINYFTCGEDEVRSWTIRKGTKAPQAAGVIHTDFEKAFVVGEIMHYQDLFDYKTENACRAAGKYLTKGKEYVMESGDIAHWK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NI3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149503 for 1526 contacts (-98.0/contact) +
2D Compatibility (PS) -26078 + (NN) -4597 + (LL) 228
1D Compatibility (HY) -2000 + (ID) 1500
Total energy: -183450.0 ( -120.22 by residue)
QMean score : 0.160
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