Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFLLIGLSEHRPLPLGQGSPLRWLALLFGLLAWHAGAGERVIYPRHSEGRNPEPYVVELLQLALAR-SGGDYRLEPSAQPMPQSRAQLRLEQDDPGLQVMWA-QS-RDDLEETLLPIRIPIYRGLIGWRIPLVSAANKDILASARTLDDLRRLRFGQRQDWADTPILRAN--GLEVKTSQNYESLFRMLDAGRFEVFPREVVVIDGELEDASRAGLHLAIDQHLALHYPAAFYFFVSRQRPELAEAIRQGLEKAIADGSFERLFERHFKTRLEKLALRQRRIIELKNPYLPGKTPFQREALWYRP |
| 1WDN Chain:A ((13-223)) | --------------------------------------FVPFEF---KQGDLYVGFDVDLWAAIAKELKL---DYELK--PMDFSGIIPALQTK--NVDLALAGITITDERKKAIDFS-DGYYKSGL---LVMVKANNN----DVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPNIDNAYMELGTNRADAVLHDTPNILYFIKTAGN--GQFKAVGDSL--EAQQYGIAFPKGSDELRDKVNGALKTLRENGTYNEIYKKWFGTEPK-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WDN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88035 for 1600 contacts (-55.0/contact) +
2D Compatibility (PS) -22068 + (NN) -7391 + (LL) 6296
1D Compatibility (HY) -4800 + (ID) 1450
Total energy: -117448.0 ( -73.41 by residue)
QMean score : 0.445
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