Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDNAIPQGFEDAVELRRKNRETVVKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNIKVFETDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELDDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3JUO Chain:B ((37-184))
-------------VAARQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLP-
General information:
TITO was launched using:
RESULT:
Template:
3JUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31576 for 970 contacts (-32.6/contact) +
2D Compatibility (PS) -16093 + (NN) -6961 + (LL) 740
1D Compatibility (HY) -15600 + (ID) 4600
Total energy: -74090.0 ( -76.38 by residue)
QMean score : 0.578
(partial model without unconserved sides chains):
PDB file :
Tito_3JUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUO-query.scw
PDB file :
Tito_Scwrl_3JUO.pdb
: