Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLTLRPAGVDDLSALVELENRCFDYDRL--SRRNFQWMLTRAHASLTVAE--------GDGGVLGYALVLFHEGTSLARLYSIAIDPRARGIGLGQKLLEAAEQAARDNDRA-YMRLEVRPDNRGAIALYERNGYRPFATVRDYYEDHSEALRFEKRIRNPGHDQRRHVPFYRQTTDFTCGPACLLMAMGALQPERQLTRREELRLWREATTIYMTAGHGGCSPQGLALAAWRRGFRVKLVLSAGGPLFLDGVRNEDKKAVMRLVHEDFCEELDASGVEQKRSARLDIPRQLARGGQPLVLISSYRLTRSKAPHWVLVTHYDEDFVYLHDPDVDHSQHRQPLDCQHIPVSHAEFDKMSRFGRSKLRAAVILFNPE |
| 4KOU Chain:A ((3-137)) | MQLSHRPAETGDLETVAGFPQ---DRDELFYCYPKAIWPFSVAQLAAAIAERRGSTVAVHDGQVLGFANFYQWQHGDFCALGNMMVAPAARGLGVARYLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGYQPRAIAERHDPDGRRVALIQMDKPLE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -45710 for 871 contacts (-52.5/contact) +
2D Compatibility (PS) -13898 + (NN) -9213 + (LL) 14464
1D Compatibility (HY) -8000 + (ID) 1900
Total energy: -64257.0 ( -73.77 by residue)
QMean score : 0.459
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