Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLHIDSSILGDASASRQLSAELVQAWRQNEDGLDVTYRDLAADAVAHFSALTLAAGSTP-AELRDAALKHEVAVGEEVLEEFLAADVVVIGAPMYNFTISSQLKAWIDRIAVAGKTFRYT-ENG-----PVGLAGDKKVVIVSTAGGVHAGQPTGAAH---EGYLRTVLGFFGITDIEVVRAEGLAYGEEPRTQAIAAARRQIAGQFAAA
3R6W Chain:A ((3-186))
-RILAVHASPRGERSQSRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPMYNFSVPSGLKAWIDQIVRLGVTFDFVLDN-VAQYRPL-LRGKRALIVTSRGGHGFGPGGENQAMNHADPWLRTALGFIGIDEVTVVAAEGEESGGRSFEDSCDEAEQRLLALARSA
General information:
TITO was launched using:
RESULT:
Template:
3R6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -89454 for 1303 contacts (-68.7/contact) +
2D Compatibility (PS) -19072 + (NN) -9776 + (LL) -136
1D Compatibility (HY) -14800 + (ID) 2900
Total energy: -136138.0 ( -104.48 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_3R6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3R6W-query.scw
PDB file :
Tito_Scwrl_3R6W.pdb
: