Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MSVIIALAALGLLMLAAYRGYSV---ILFAPLAALGAVLLTDPSAVAPTFTGVFMEKMVGFIKLYFPVFLLGAVFGKLIE------LAGFSRSIVAAAIRLLGTRQ---------AMLVIVLVCALLTYGGVSLFVVVFAVYPFAAEMFRQS---DIPKRLIPATIALGAFSFTMDALPGTPQIQNIIPSTFFGTHAWAAPWLGTLGALFVFAVGM-----LYLRRQANKARRNGEGYGSDLRNEPETADDLRLPNPWLALSPL--VLVGVANLLFTHWIPQWYGQVHTLQLAGMATPLQTEVGKLTAI----WAVQAALLLGILLVLASGFAAIRSRLAEGTRSAVAGSLLAAMNTASE-----YGFGAVIASLPGFLVLADALK----------SIPNPLVNEAITVTLLAGITGS------ASGGMSIALAAMSDT---------FIAAANAAQIPLEVLHRVAAMASGGMDTLPHNGAVITL------LAVTGLTHREAYKVIFGITLIKTLAVF-FVIGLFYATGLV |
| 3ALX Chain:A ((8-549)) | CSGPTTIRGQFSNMSLSLLDLYLGRGYNVSSIVTMTSQGMYGGTYLVEK----PSMYRVFEVGVIRNPGLGAPVFHMTNYLEQPVSNDLSNCMVALGELKLAALCHGEDSITIPYQGSGKGVSFQLVKLGVWKSPTDMQSWVPLSTDDPVIDRLYLSSHRGVIADNQAKWAVPTTRTDDKLRMETCFQQACKGKIQALCENPEWAPLKDNRIPSYGVLSVDLSLTVELKIKIASGFGPLITHGSGMDLYKSNHNNV------YWLTIPPMKNLALGVINTLE--WIPRF-----KVSPYRFTVPIKEAGGDCHAPTYLPAEVDGDVKLSSNLVILPG-QDLQYVLATYDTSRVEHAVVYYVYSPSRSFSYFYPFRLPIKGVPIELQVECFTWDQKLWCRHFCVLADSESGGHITHSGMVGMGVSCCPKIVQQLGSDVLLPLTHERINTSMNKSIHIVVTMAKSLENSVENKIVSLDPSEAGPPRYLKDRYRFYLEHLSLAIYESTKKDEGWYFMTLEKNISVQRFCLHLKLYE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ALX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -378839 for 3451 contacts (-109.8/contact) +
2D Compatibility (PS) -45510 + (NN) 13544 + (LL) 1504
1D Compatibility (HY) -15200 + (ID) 3800
Total energy: -428301.0 ( -124.11 by residue)
QMean score : 0.019
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