Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHPTPRLAAALLAGSGLGWPLLAQADLVEDSHASLELRNFYFNRDFRQSGARDNADEWAQGFLLRLESGFSEGTVGFGVDAIGLLGFKLDSGSGSGGTGLLPADGSAGGSQDDYAKLGLTAKARVSNSLLKVGALHFKSPLVSANDTRLLPELFRGALLDVQEIDGLTLRGAHLDRNKLNSSSDYQVFSANRIGGRSDAFDFAGGDYRLTPALTASLHQGRLKDIYRQTFAGLVHTLDLGGQRSLKSDLRFARASEDGGFR--ELDNRAFGALFSLRLGAHAVAAGYQRISGDDPYPYI----AGSDP-YLVNFIQIGDFGNVDERSWQLRYDYDFGALGLPGLSFMSRYVSGDNV-------------ARGAANDGKEWERNTDLGYVVQSGPLKNLGVKWRNATVRSNF---ANDLDENRLILSYSLALW |
| 3SY7 Chain:A ((13-419)) | --------------------------FIEDSSLDLLLRNYYFNRD-------DRVD-WTQGFLTTYESGFTQGTVGFGVDAFGYLGLKLDGT-------------------DDYSRAGGAVKVRISKTMLKWGEMQPTAPVFAAGGSRLFPQTATGVQLQSSEFEGLDLEAGHFTE----------ELYATYAGETAKSADFIGGRYAITDNLSASLYGAELEDIYRQYYLNSNYTIPLASDQSLGFDFNIYRTNDEGKAKAGDISNTTWSLAAAYTLDAHTFTLAYQKVHGDQPFDYIGFGGAGGDSIFLANSVQYSDFNGPGEKSWQARYDLNLASYGVPGLTFMVRYINGKDIDGTKMSDNNVGYKNYGYGEDGKHHETNLEAKYVVQSGPAKDLSFRIRQAWHRANADQGEGDQNEFRLIVDYPLSIL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3SY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -31798 for 2661 contacts (-11.9/contact) +
2D Compatibility (PS) -34739 + (NN) 6299 + (LL) 1472
1D Compatibility (HY) -25200 + (ID) 7300
Total energy: -91266.0 ( -34.30 by residue)
QMean score : 0.235
|
|
|