Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSSKPLAEYARKRDFRQTPEPSGRKPRKDSTGLLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIPQGHYGAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKERPDSVLSERTLLPRHGEAATPAARPARRGKSGGKTPMPEWIAPELA--------SLVEQPPRGEWAYELKLDGYRLMSRIEDGHVRLLTRNGHDWTERLPHL-EKALAGLGLQRSWLDGELVVLDEEGRPD-FQALQNAFEEGRGENILYV---------LFDLPYHEGEDLRDVALEERRARLEALLEGRD--EDPLRFSATLAEDPRDLLASACKLGLEGVIGKRLGSAYR-SRRSNDWIKLKCQLRQ-EFVIVGYTEPKGSRRHI-GALLLGLYSPDEERRLRYAGKVGSGFTAASLKKVRERLEPLAVRSSPLAKVPPARETGSVQWVRPQQLCEVSYAQMTR------GGIIRQAVFHGLREDKPAREVTGERPAGPPPLRGARKASAGASRAATAGVRISHPQRLIDPSIQASKLELAEFHARYADLLLRDLRERPVSLVRGPDGIGGELFFQKHAARLKIPGIVQLDPALDPGHPPLLQIRSAEALVGAVQMGSIEFHTWNASLANLERPDRFVLDLDPDPALPWKRMLEATQLSLTLLDELGLRAFLKTSGGKGMHLLVPLERRHGWDEVKDFAQAISQHLARLMPERFSAVSGPRNRVGKIFVDYLRNSRGASTVAAYSVRAREGLPVSVPVFREELDSLQGANQWNLRSLPQRLDELAGDDPWADYAGTRQRISAAMRRQLGRG |
4EQ5 Chain:A ((189-546)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAFKVRVELVERAYMLTSDFGFVAKVAKLEGDEGLAKVKIQVGKPIKPMLAQMAANVREALVEMG--GEAEFEIKYDGARVQVHKNGNKVLIYSRRLENVTKSIPEVVERVKEALKPEKVIVEGELVAVEETGRPRPFQYVLRRFR--RKYNIEEMIEKIPLELNLFDILYVDGQNMIDTPFMERRKVLESVVNSNEWIKSAENLITKSPEEAEAFYHKALDLGHEGLMAKRLDSTYEPGNRGKKWLKIKPTMENLDLVVLGAEWGEGRRSGVLSSFLLGAYDPVKGDFVP-VGKVGSGFTDEDLVEFTKMLKPLI-----------KKEHGKEVELEPKVVIEVAYQEIQKSPKYESGFALRFPRYIALREDKGPEDADTVQRLAELYQFQERLKGGR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EQ5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56318 for 2421 contacts (-23.3/contact) +
2D Compatibility (PS) -35274 + (NN) -11097 + (LL) 27492
1D Compatibility (HY) -20800 + (ID) 5250
Total energy: -101247.0 ( -41.82 by residue)
QMean score : 0.337
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