Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKVVLYKRLSAPLMERLRERVEVLLVEEPGRDGLARLRDA------LPEAHGLLGASLRLDAGLLDLAPRLEAIASVSVGVDNYDIDYLDRRGILLSNTPDVLTETTADTGFALILATARRVVELAGWVRAGE---WKKSVGAAQFGTDVHGKTLGIVGMGRIGEALARRGHHGFGMRVLYH-SHSPKPHVEERYAASYRPLDALLEESDFVCLTLPLTAATEGLIGAAQFARMRPQAIFINISRGRVVDEAALIEALAQRRIRAAGLDVFERE-------PLSPDSPLLRLPNVVATPHIGSATEETREAMARCAVDNLLAALAGARPLNLVNPSAWARRRGA |
4NU6 Chain:A ((17-326)) | --------QLLAPHCELITNQTDSTLTRE---EILRRCRDAQAMMAFMPD---------RVDADFLQACPELRVIGCALKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQPRF----YGTGLDNATVGFLGMGAIGLAMADR-LQGWGATLQYHEAKALDTQTEQRLGLRQVACSELFASSDFILLALPLNADTLHLVNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAVRAVKLEIERCAAQNILQALAGERPINAVN---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -151495 for 2249 contacts (-67.4/contact) +
2D Compatibility (PS) -32056 + (NN) -15178 + (LL) 1940
1D Compatibility (HY) -21200 + (ID) 5800
Total energy: -223789.0 ( -99.51 by residue)
QMean score : 0.431
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