Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLDVFLDFLLGMVLGCLGGLFGIGGGLLAIPALGVIFGLDQQLAQGTALVMVVPNVVLALWRYHQRNRIDPRQAGVLALTGLLCAFLASSVAARIDAARMREAFVIFLLALAGYMFWRLFRRPPQGGATPRYGLPWMGVLGLGAGSLGGLFGVGGGVLATPVLTSVFGLAQVVAQGLALALAAPSTAVALGTYAMHGHVDWRMGIPLALGGLLSISWGVRLAHALPERSLRMAFCAFLALCAVLLLVRG |
| 1S5L Chain:T ((1-11)) | -------------------------------------------------------------------------------------------------METITYVFIFACIIALFFFAIFFREPPRITK------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1S5L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -1228 for 36 contacts (-34.1/contact) +
2D Compatibility (PS) -1047 + (NN) 768 + (LL) 14968
1D Compatibility (HY) -800 + (ID) 100
Total energy: 12561.0 ( 348.92 by residue)
QMean score : 0.321
|
|
|