Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------MWF-RNLLVYRLTQDL-------QLDADSLEKALGEKSARPCASQELTTYGFTAP----------------------FGKGPDAPLVHVSQDFFLISARKEERILPGSVVRDALKEKVDE---------IEAQQMRKVYKKERDQLKDEIVQT------------LLPRAFIR-RSS-TFAAIAPSLGLIL-VDSASAKKAEDLLSTLREALGSLPVRPLSVKVAPTATLTDWVKT-QEAAGDFHVLDECELRDTH----EDGGVVRCKRQDLTSEEIQLHLTAGKLVT--------------------QLSLAWSDKLSFVLDD-KLAVKRLRFEDLLQEQAEKDG-GEDALG-QL-DASFTLMMLTFAEFLPALFEALGG--EEIPQGV |
| 4N9N Chain:A ((11-438)) | NLNLIDMKLFHHYCTKVWPTITAAKVSGPEIWRDYIPELAFDYPFLMHALLAFSATHLSRTETGLEQYVSSHRLDALRLLREAVLEISENNTDALVASALILIMDSLANASVDNIFEMLRIDEGLRLKIYKDTEGYYTIGIG---HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYVDSMSPSAWIFHVKGAATILTAVWPLSERSKFHNIISVDLSDLGDVINPDVGTITELVCFDESIADLYPVGLDSPYLITLAYLDKLHREKNQGDFILRVFTFPALLDKTFLALLMTGDLGAMRIMR-SYYKLLRGFATEVKDKVWFLEGVTQVLPQ-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4N9N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34086 for 1898 contacts (-18.0/contact) +
2D Compatibility (PS) -31476 + (NN) -10135 + (LL) 436
1D Compatibility (HY) -8400 + (ID) 2650
Total energy: -86311.0 ( -45.47 by residue)
QMean score : 0.280
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