Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNNLIEVRDLSKTFTLHQQQGVVLNVLRGLNFNVAGGECLVLHGRSGAGKSTLLRTLYGNYLPAGGSIRLRHAGDWLELVGAEPREVLAVRRQTLGYVSQFLRVIPRVATL-DVVMEPALARGWSRDSAELRARSLLARLNIPERLWQLAPGTFSGGEQQRVNIARGFMVEWPILLLDEPTASLDEANRQVVLELIGEAKAAGAALIGIFHDRAAREAVASRYLDMSQELSRQEQAHVV
4YMW Chain:J ((1-210))---MIFVNDVYKNFG-------SLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFI----DGVKINNGKVN--INKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQY-PIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMD------------


General information:
TITO was launched using:
RESULT:

Template: 4YMW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -141428 for 1679 contacts (-84.2/contact) +
2D Compatibility (PS) -22014 + (NN) -5826 + (LL) 2592
1D Compatibility (HY) -17200 + (ID) 3150
Total energy: -187026.0 ( -111.39 by residue)
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_4YMW.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMW-query.scw
PDB file : Tito_Scwrl_4YMW.pdb: