Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKGSAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVTQYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSSRPLAAHAEQSREIEDWFARLGTQVVRDWSGLP----LKKINNHSYWAAWSVMSTAVVTNRRDLFDWAVSEFKV----AANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAAFAQVNG-VDLRQENHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPKMLEAKKDREPFNSFRLGGEVTRVFSREGGS |
| 3E7J Chain:A ((80-274)) | ---------------------------------------------------------------------------------------------GLTVRVELMALNYLMTKDPKVGREAITSIIDTLETATFK-PA-GDI-SRGIGLFMVTGAIVYDWCYD--QLK----PEEKTRFVKAFVRLAKMLECGYPPVKDKSIVGAASEWMIMRDLLSVGIAIYDEFPEMYNLAAGRFFKEHLVARNWFYPSHNYH-Q------GMSALNVRFTNDLFALWILDRMGAGNVFN---PGQQFILYDAIYKRR--------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E7J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49144 for 1413 contacts (-34.8/contact) +
2D Compatibility (PS) -19787 + (NN) -6519 + (LL) 10116
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -71684.0 ( -50.73 by residue)
QMean score : 0.394
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