Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLIDPRAIIDPSARLAADVQVGPWSIVGAEVEIGEGTVIGPHVVLKGPTKIGKHNRIYQFSSVGEDTPDLKYKGEPTRLVIGDHNVIREGVTIHRGTVQDRAETTIGDHNLIMAYAHIGHDSVIGNHCILVNNTALAGHVHVDDWAILSGYTLVHQYCRIGAHSFSGMGSAIGKDVPAYVTVFGNPAEARSMNFEGMRRRGFSSEAIHALRRAYKVVYRQGHTVEEALAELAESAAQFPEVAVFRDSIQSATRGITR
4R37 Chain:A ((21-275))
--MISPLAYIHPEAKIGENVEIAPFVYIDRNVVIGDNNKIMANANILYGSRIGNGNTIFPGAVIGAIPQDLKFKGEESTAEIGDNNLIRENVTINRGTAA-KGRTIVGNNNLLMEGVHVAHDALIGNGCIVGNSTKMAGEIIIDDNAIISANVLMHQFCRVGGYVMIQGGCRFSKDIPPYIIAGREPIAYSGINIIGLRRRGFSNEIIENIHNAYRIIYQSGLNTSDALTKVEAEVPASPEIEYIVDFIRNSERGIIR
General information:
TITO was launched using:
RESULT:
Template:
4R37.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -172487 for 2220 contacts (-77.7/contact) +
2D Compatibility (PS) -27915 + (NN) -12723 + (LL) 104
1D Compatibility (HY) -20400 + (ID) 4700
Total energy: -238121.0 ( -107.26 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_4R37.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4R37-query.scw
PDB file :
Tito_Scwrl_4R37.pdb
: