Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPVLPEQAQEALDAFGHTASWEQRARLLLQWGERLAPLAEHERQEEHRVHGCESLVWLLGEQRDGHWRFRADSDARLIRGLLAVLLARVDGIETRELARLDLNDWFTCLGLSRQLSPSRSNGLNAVLQRMRELAGQTAG
1TO2 Chain:E ((224-250))
---------------------------------------------------------------------------SPHVAGAAALILSKHPNWTNTQVRSSL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TO2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12314 for 124 contacts (-99.3/contact) +
2D Compatibility (PS) -3087 + (NN) -3335 + (LL) 7844
1D Compatibility (HY) -400 + (ID) 150
Total energy: -11442.0 ( -92.27 by residue)
QMean score : 0.648
(partial model without unconserved sides chains):
PDB file :
Tito_1TO2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TO2-query.scw
PDB file :
Tito_Scwrl_1TO2.pdb
: