Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MA-SHE-LDYRILGESMQTVEI--------------ELDPGETVIAEA----GAMNYMTGDI----------RFTAR-MGDGSD----GSLLGKLWSAG-KRKLGGESVFMTHFTNEGQGKQHVAFAA-PYP-GSVVAVD-------------LDDVG-GRLFCQKD-SFLCAAYGTRVG-------------------------IAF-TKRLGAGFFGGEGFILQKLE----GDGLV-FVHAGGTLIRRQLNGETLRVDT-------------------------GCLVAFTDGIDYDVQLAGGLKSMLFGGEGLLLTTLKGSGTVWLQS----LPFSR-LAGRI------YDATFRAREEVRTNNG--------- |
| 4KQ7 Chain:A ((2-374)) | QSNMTNEMFDLAKLKSGVKNKRISSTDPTGGNRDHLEPFKPGEKRIIADIKGMGVINHIWVTIAPPPPTLSRNDIIIRMYWDGNDYPSVESPIGPFFGQGWDERYNYASLPLSAGPENGTGLSC--YFAMPFEKGARIEIENQSDRNIDAFYFYVDYLEMAKL--PKDMGRFHAWYNHNLTEALPEGETEWGVTGAQKPNTTGERNYVFMETQ-GKGHFVGINYYVHCPTPMWYGEGDDMWFIDGEKVPSLIGTGTEDFFNTAWCPKEAFSHPYFGYPRVNNDIGWLGRTHVYRFFIEDPIFFEKSLKGTIEHGSNNNLTLDLSTVAYWYQDSAVALPEAPTKAQRAPKPFINHVDIHRWRDAWRKSKGNKATLWGNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KQ7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58609 for 1612 contacts (-36.4/contact) +
2D Compatibility (PS) -25306 + (NN) 2803 + (LL) 700
1D Compatibility (HY) -7200 + (ID) 2850
Total energy: -90462.0 ( -56.12 by residue)
QMean score : 0.247
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