Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPLYRAAIHQLFLALDLPTPNDEESVLSLQVGP-HLCHLAEHPTDHLLMFTRLEGQGDATANEQNLFSQDPCKPILGRDPESGERLLWNRQPLQLLDRAQIHHQLEQLVAAAEELR
2BSJ Chain:A ((6-115))
--TTFTELMQQLFLKLGLNHQVNENDVYTFEVDGHIQVLIACYHQQWVQLFSELGADLPTN---DNLFGEHWPAHVQG-RLDGKS-ILWSQQSLVGLDIDEMQAWLERFIDDIEQRK
General information:
TITO was launched using:
RESULT:
Template:
2BSJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42941 for 712 contacts (-60.3/contact) +
2D Compatibility (PS) -11588 + (NN) -3028 + (LL) 496
1D Compatibility (HY) -8800 + (ID) 1250
Total energy: -67111.0 ( -94.26 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_2BSJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BSJ-query.scw
PDB file :
Tito_Scwrl_2BSJ.pdb
: