Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNGVSRLLSLALLGAALHWAPAQAEEQPRLFELLGQPGYKATW--HAMFKGESDVPKWVSDASGPSSPSTSLSLEGQPYVLANSCKPHDCGNNRLLVAFRGDKSAAYGLQVSLPDEPAEVMQTPSKYATYRWYGEPSRQVRELLMKQLESDPNWK |
3PNS Chain:A ((23-86)) | -----------LNGATLAIIPGDPARVQKIAELMDNPVFLASHREYTVYRAELDGQSVVVCSTGIGGPSTSIAVE-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4920 for 408 contacts (12.1/contact) +
2D Compatibility (PS) -6009 + (NN) 2280 + (LL) 4984
1D Compatibility (HY) -3600 + (ID) 900
Total energy: 1675.0 ( 4.11 by residue)
QMean score : 0.063
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