Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNAADRVMQSYGRCCASTGFFDDFYRHFLASSPQIRAKFATTD-------------MTAQKHLLRAGIMNLVMYARGMSDSKLRALGASHS-RAALDIRPELYDLWLDALLMAVAEHD-RDCDAETRDAWRDVMGRGIAVIKSYY
2R80 Chain:B ((6-145))
-EEKQLITSIWGKVN-VADCGAEALARLLIVYPWTQRFFSSFGNLSSATAISGNPNVKAHGKKVLTSFGDAVKNLDNI-KGTFAQLSELHCDK--LHVDPENFRLLGDILVIILAAHFGKDFTPECQAAWQKLVRVVAHALARKY
General information:
TITO was launched using:
RESULT:
Template:
2R80.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65709 for 900 contacts (-73.0/contact) +
2D Compatibility (PS) -13370 + (NN) -7240 + (LL) 612
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -92757.0 ( -103.06 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_2R80.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2R80-query.scw
PDB file :
Tito_Scwrl_2R80.pdb
: