Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNITTIAKRLSLLVLFIAPTAGWAAESMVPAPPQLAAKSYVLMDGESGQVLVENNGDQRLPPASLTKLMTAYIATKEIEAGRIGENDLVTVSEHAWRTGGSRMFIKVGSQVSVSDLLHGIIIQSGNDASVALAEHIAGSEDAFADMMNTTAQKLGLTNSHFMDATGLPN-PDHYSSARDMAVLARAII----YGEPSHYAIYAQK--EFLWNNIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCLVASAVRDGQRMIAVVFGTNSEQARAAETQKLLTYGFRFFESRNFYKKGTELTKGLVWKGSEHEVKAGLAEDLTMTLPRGQMQKLQA-SMVLEPQLMAPIQQGQ---VIGKVEVKLDDKVIRSADLVALNAVEEGGFFRRLWDSIRLFFYGLFN |
| 3MFD Chain:A ((4-320)) | -------------------------------AIDVSAKSAIIIDGASGRVLYAKDEHQKRRIASITKIMTAVLA---IESGKMDQT--VTVSANAVRTEGSAIYLTEGQKVKLKDLVYGLMLRSGNDAAVAIAEHVGGSLDGFVYMMNQKAEQLGMKNTRFQNPHGLDDHENHYSTAYDMAILTKYAMKLKDYQKISGTKIYKAETMESVWKN----KNKLLTMLYPYSTGGKTGYTKLAKRTLVSTASKDGIDLIAVTINDPNDW---DDHMKMFNYVFEHYQTYLIAKKG-DIPK---LKGTFYESKAFIKRDITYLLTEEEKENVKINTTLLKPKKAWEKDASKIPDIVGHMEIMFNDATI--------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130224 for 2597 contacts (-50.1/contact) +
2D Compatibility (PS) -32660 + (NN) -7951 + (LL) 6840
1D Compatibility (HY) -21600 + (ID) 5550
Total energy: -191145.0 ( -73.60 by residue)
QMean score : 0.489
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