Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKSWLTASLLALTVASPFAAADIQGHKAGDFIIRGGFATVDPDDSSSDIKLDGAKQRGTKATVDSDTQLGLTFTYMFADKWGVELVAATPFNHQVDVKGLGPGLDGKLADIKQLPPTLLLQYYPMGGTNSAFQPYGGLGVNYTTFFDEDLASNRKAQGFSSMKLQDSWGLAGELGFDYMLNEHALFNMAVWYMDIDTKASINGPSALGVNKTKVDVDVDPWVYMIGFGYKF |
| 2F1V Chain:D ((2-191)) | ---------------------------EAGEFFMRAGSATVRPTEG--------------GFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATG-----DIATVHHLPPTLMAQWY-FGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVGVDYLINRDWLVNMSVWYMDIDTTANYK----LGGAQQHDSVRLDPWVFMFSAGYRF |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F1V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -41010 for 1423 contacts (-28.8/contact) +
2D Compatibility (PS) -19184 + (NN) -38 + (LL) 2072
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -82310.0 ( -57.84 by residue)
QMean score : 0.281
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