Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFERPILITGGAGFIGSHLTDALLARGYRVRVLDNLSTGKRDNLP--LDDERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDED-----TPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTRDFIYVADLVDFLVQALEATAVEPGAVNVGLNRSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
4GLL Chain:A ((8-241)) | -----ILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIE-----VDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYG-DPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMND--GRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNVSSP--VNLG------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GLL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -143848 for 1803 contacts (-79.8/contact) +
2D Compatibility (PS) -24507 + (NN) -8650 + (LL) 4836
1D Compatibility (HY) -16400 + (ID) 4550
Total energy: -193119.0 ( -107.11 by residue)
QMean score : 0.494
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