Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVFQHDIYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD----GVHAPRHPRIRREEL--DITDSQRLQRLFEALPR----LDVLVNNAGISRDRE--EYDLATFERVLRLNLSAAMLASQLARPLLAQRG-GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRR------IMQRTPLARWGEAPEVASAAAFLCGPGASFVTGAVLAVDGGYLCA
3O03 Chain:A ((34-282))
---------GKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQT------------HPFDQFIIAKTPAARWGEAEDLMGPAVFLASDASNFVNGHILYVDGGIL--
General information:
TITO was launched using:
RESULT:
Template:
3O03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126543 for 1807 contacts (-70.0/contact) +
2D Compatibility (PS) -23701 + (NN) -11849 + (LL) 2232
1D Compatibility (HY) -18800 + (ID) 4400
Total energy: -183061.0 ( -101.31 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_3O03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3O03-query.scw
PDB file :
Tito_Scwrl_3O03.pdb
: