Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDTTNPIGFTDANELREKNRATVEKYMNTKGQDRLRRHELFVEDGCGGLWTTDTGSPIVIRGKDKLAEHAVWSLKCFPDWEWYNINIFGTDDPNHFWVECDGHGKILFPGYPEGYYENHFLHSFELEDGKIKRNREFMNVFQQLRALSIPVPQIKREGIPT
3JUO Chain:B ((40-184))
----------------RQHNRKIVEQYMHTRGEARLKRHLLFTEDGVGGLWTTDSGQPIAIRGREKLGEHAVWSLQCFPDWVWTDIQIFETQDPNWFWVECRGEGAIVFPGYPRGQYRNHFLHSFRFENGLIKEQREFMNPCEQFRSLGIEVPEVRRDGLP-
General information:
TITO was launched using:
RESULT:
Template:
3JUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29306 for 951 contacts (-30.8/contact) +
2D Compatibility (PS) -15771 + (NN) -7019 + (LL) 412
1D Compatibility (HY) -16000 + (ID) 4650
Total energy: -72334.0 ( -76.06 by residue)
QMean score : 0.590
(partial model without unconserved sides chains):
PDB file :
Tito_3JUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3JUO-query.scw
PDB file :
Tito_Scwrl_3JUO.pdb
: