Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLLDIKNLSVRFGDTTAVPVVDGLDLSVDKGEVLAIVGESGSGKSVTMMALMGLIDAP--GWVSADHLRFDGHDMLTLKGRQRRRIVGKDMAMVFQDPMTALNPSYTVGYQIEE--VLRLHLGLRGKALRQRALELLERVEIPAAASRLDAYPHQLSGGMSQRVAIAMAIAAEPKLLIADEPTTALDVTIQAQIMELLLNLQRDQDMALILITHDLAVVAETAQRVCVMYAGEAVEIGGVPALFDRPTHPYTEALIKAIPEHCAGEARLATLPGIVPGRYDRPRGCLLSPRCPYAQEHCRQERPALETHERGAVRCFYPLNLLNEVA |
3TIF Chain:A ((23-222)) | -----------------------NVNLNIKEGEFVSIMGPSGSGKS-TMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKI-----GFVFQ--QFNLIPLLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFA--NHKPNQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIMQLLKKLNEEDGKTVVVVTHDIN-VARFGERIIYLKDGE---------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139869 for 1538 contacts (-90.9/contact) +
2D Compatibility (PS) -21801 + (NN) -11973 + (LL) 7808
1D Compatibility (HY) -14400 + (ID) 3650
Total energy: -183885.0 ( -119.56 by residue)
QMean score : 0.470
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