Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MELLSGAEMVVRSLRDEGVKYIYGYPGGALLHIYDALFKEHDVTH-ILVRHEQAATHMADGYARATGKPGVVLVTSGPGATNAITGIATAYMDSIPMVILSGQVPSNMVGTDAFQETDMVGISRPIVKHSFIIKHPSEIPEVIKKAFYLAQSGRPGPVVVDIPKDMGDPTQKFEYSYPKKVKLRSYSPAVRGHSGQ-IRKAAEMLLAAKRPVVYSGGGVIMGNAAAPLTELAQMLNLPVTNTLMGLGGYPG----ADR--QFLGMLGMHGSFTANLAMHHSDVILAVGARFDDRVINGAAKFCPNAKIIHIDIDPASISKTIKADIPIVGPVDSVLTEMVAIVREIGETPNQDAQAAWWK----QIDEWRGNRGLFPYDKGDGSIIKPQTVIETLYEVTHGDAFITSDVGQHQMFASQYYKFNKPNRWINSGGLGTMGFGFPAAMGIKLNFPDDDVACVTGEGSIQMNIQELSTCLQYDLPVKIVNLNNGALGMVRQWQDMQYNSRYSHSYMESLPDFVKLAEAYGHVGMRITDLKDLKPKMEEAFAMKNRLVFLDIQVDASEHVYPMQIRDGAMRDMWLSKTERT |
1POX Chain:A ((3-524)) | --ILAGA-AVIKVLEAWGVDHLYGIPGGSINSIMDALSAERDRIHYIQVRHEEVGAMAAAADAKLTGKIGVCFGSAGPGGTHLMNGLYDAREDHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYNVTAVNAATLPHVIDEAIRRAYAHQ-GVAVVQIPVDL--PWQQISAEDWYASANNYQTPLLPEPDVQAVTRLTQTLLAAERPLIYYGIGA--RKAGKELEQLSKTLKIPLMST------YPAKGIVADRYPAYLGSANRVAQKPANEALAQADVVLFVGNNYPFAEVSKA--FKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSERESTP-------WWQANLANVKNWRAYLASLE-DKQEGPLQAYQ-VLRAVNKIAEPDAIYSIDVGDINLNANRHLKLTPSNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLAGDGGASMTMQDLVTQVQYHLPVINVVFTNCQYGFIKDEQEDTNQNDFIGVEFNDI-DFSKIADGVHMQAFRVNKIEQLPDVFEQAKAI-------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1POX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -277369 for 4476 contacts (-62.0/contact) +
2D Compatibility (PS) -55268 + (NN) -22258 + (LL) 4388
1D Compatibility (HY) -26000 + (ID) 8250
Total energy: -384757.0 ( -85.96 by residue)
QMean score : 0.465
|
|
|