Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIFVFAALAGSAVLAGCASPQHGAIPVVDSGTPVSNQESGGFRITRTQVPRTQQGAATQGIPQGGDSGVVVMVPQGANSAPIQTFPAQSGAAPISSAPLGTGTQYQAPPSSASTPPLGGSYNMPPSGASRSAPTGIPASGSAGSLAADEQLDGPVLAMLTTAQQQQGSGDLNSAAASLERAQRIAPREPQVLYRLAQVRLAQGDAAQA----EQVARRGLSYANGRPALQAGLWELIAQAREKQGDSAGAALARQKAKVSS |
2PL2 Chain:A ((43-118)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRYDAALTLFERALKENPQDPEALYWLARTQLKLGLVNPALENGKTLVARTPRYLGGYMVLSEAYVALYRQAEDRE----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PL2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -6527 for 434 contacts (-15.0/contact) +
2D Compatibility (PS) -8154 + (NN) -6728 + (LL) 6776
1D Compatibility (HY) -3600 + (ID) 1050
Total energy: -19283.0 ( -44.43 by residue)
QMean score : 0.544
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