Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFTPANRAYPYTRLRRNRRDDFSRRLVRENVLTVDDLILPVFVLDGVNQRESIPSMPGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGIITDVALDPFTTHGQDGILDDDGYVLNDVSIDVLVRQALSHAEAGAQVVAPSDMMDGRIGAIREALESAGHTNVRIMAYSAKYASAYYGPFRDAVGSASNLGKGNKATYQMDPANSDEALHEVAADLAEGADMVMVKPGMPYLDIVRRVKDEFRAPTFVYQVSGEYAM-HMGAIQNGWLAESVILESLTAFKRAGADGILTYFAKQAAEQLRRGR |
1L6Y Chain:A ((6-319)) | -------------RPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDYKAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDET--GSDAWREDGLVARMSRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHG-VDNDATLENLGKQAVVAAAAGADFIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSAL---KGDRKSYQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEYAMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEK----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164909 for 2739 contacts (-60.2/contact) +
2D Compatibility (PS) -34321 + (NN) -15465 + (LL) 1048
1D Compatibility (HY) -20400 + (ID) 6500
Total energy: -240547.0 ( -87.82 by residue)
QMean score : 0.727
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