Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIIRLDVILAKNKVRSKELAEAIGITEQNLSLLKNGKVKGIRLDTLEKICAFLDCQPGDILEYVADD
2LYK Chain:A ((1-66))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNP-SLQLALKIAYYLNTPLEDIFQWQPE-
General information:
TITO was launched using:
RESULT:
Template:
2LYK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47690 for 468 contacts (-101.9/contact) +
2D Compatibility (PS) -7282 + (NN) -5202 + (LL) 128
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -66146.0 ( -141.34 by residue)
QMean score : 0.752
(partial model without unconserved sides chains):
PDB file :
Tito_2LYK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2LYK-query.scw
PDB file :
Tito_Scwrl_2LYK.pdb
: