Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMKITISKVLPDFETLVVGLFEDGEL------VSNGKVLQ--DKQIINSIKKFSHFNGGFGEFFSVTLSD--GKNVIIVGLGKRDE-WN--------ENKELSVGGKIYCELGRLKIKQATVSIEGSAENIAYGAFLRSFKFDKYKTKKDEEITEVEEIMVLAKDEQLNDAEKSFEHLRQEGEGIFLARTFITEPPNVLYPESYADCIKSELTKFG--LEIEVLDKKQMEKKKMGALLGVAQGSSKEPKLVVIRWNGASK-EQKPIAFVGKGITFDTGGVSLKPSRGMESMKYDMAGSAAVVGVMRTLAGRKARINAVGVVALAENAIDGNAQRPSDVVTSMSGQTIEVLNTDAEGRLVLADALWYTQDRFAPEFMIDLATLTGAIVVALGNNEYAGLFSNNDELANRLVEAGNEANEKLWRFPMNETYDKI-IDSPIADVQNIAPTGSGGDSIMAAQFLQRFVNDTCWAHLDIAGTAWHEKGTDISPKGAVGFGVRLLNKLVEKYYETSD |
| 1LAM Chain:A ((1-483)) | ------------TKGLVLGIYSKEKEEDEPQFTSAGENFNKLVSGKLREILNISGPPLKAGKTRTFYGLHEDFPSVVVVGLGKKTAGIDEQENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPCGDAQAAAEGAVLGLYEYDDLKQKRKVV----VSAKLH-----GSEDQEAWQRGVLFASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPNASEPPLVFVGKGITFDSGGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPGDVVRARNGKTIQVDNTDAEGRLILADALCYAH-TFNPKVIINAATLTGAMDIALGS-GATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTRQVIDCQLADVNNIGK-YRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEFLFRFSQ--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1LAM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -224575 for 4318 contacts (-52.0/contact) +
2D Compatibility (PS) -49322 + (NN) -20749 + (LL) 2060
1D Compatibility (HY) -24000 + (ID) 7550
Total energy: -324136.0 ( -75.07 by residue)
QMean score : 0.549
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