Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LEKYLICSDLDGTLLLKN-QTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKL--VHPKADVIASNGGVVAVSGEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPP---YYFTDEEDK-GRVNATKLVAIKSREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
2RBK Chain:A ((1-260)) | -MTKALFFDIDGTLVSFETHRIPSSTIEALEAAHAKGLKIFIATGRPKAIINNLSELQDRNLIDGYITMNGAYCFVGEEVIYKSAIPQEEVKAMAAFCEKKGVPCIFVEEHNISVCQPNEMVKKIFYD-FLHVNVI--PTV-SFEE---A-SN-KEVIQMTPFITEE-E-EKEVLPSIP-TCEI--GRWYPAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAMGQAKEDVKAAADYVTAPIDEDGISKAMKHFGI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RBK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84821 for 2269 contacts (-37.4/contact) +
2D Compatibility (PS) -27649 + (NN) -16810 + (LL) 1800
1D Compatibility (HY) -10400 + (ID) 3000
Total energy: -140880.0 ( -62.09 by residue)
QMean score : 0.419
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