Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYLICSDLDGTLLLK-NQTISPKTLNLLQQLIEEGHHFAVSTGRMYNSATDFAKLVHPKADVIASNGGVVAVS-GEIIQQEKMKQSALLETFLLCQNHDLPVFFFSTDTVFYTKNPP--YYFTDEEDKGRVNATKLVAIKSREIFLEHADQFINGIVIEEEDFDKLAVLRSDLEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFGDGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKHLNR |
| 3R4C Chain:A ((10-267)) | HMIKVLLLDVDGTLLSFETHKVSQSSIDALKKVHDSGIKIVIATGRAASDLHEID-AVP-YDGVIALNGAECVLRDGSVIRKVAIPAQDFRKSMELAREFDFAVALELNEGVFVNRLTPTVEQIAG-IVEHPV--PPVVDIEE---MFER-KECCQLCFYFDE-EA-EQKVMPLLS-GLSA--TRWHPLFADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAMGNASEKVQSVADFVTDTVDNSGLYKALKHFGV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R4C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -108844 for 2169 contacts (-50.2/contact) +
2D Compatibility (PS) -27561 + (NN) -15208 + (LL) 972
1D Compatibility (HY) -12800 + (ID) 3250
Total energy: -166691.0 ( -76.85 by residue)
QMean score : 0.476
|
|
|