Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-------MNLIAAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIGVVIAFMTFAG--
1C0V Chain:A ((1-79))
MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPDLIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA
General information:
TITO was launched using:
RESULT:
Template:
1C0V.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44375 for 447 contacts (-99.3/contact) +
2D Compatibility (PS) -7190 + (NN) -2244 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 1350
Total energy: -63559.0 ( -142.19 by residue)
QMean score : 0.215
(partial model without unconserved sides chains):
PDB file :
Tito_1C0V.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C0V-query.scw
PDB file :
Tito_Scwrl_1C0V.pdb
: