Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MNLI--AAAIAIGLSALGAGIGNGLIVSRTVEGVARQPEARGQLMGIMFIGVGLVEALPIIG----VVI----AFMTFAG-------
4CU5 Chain:A ((1-85))
MYKHTIVYDGEVDKISATVVGWGYNDGKILICDIKDYVP-----GQTQNLYVVGGGACEKISSITKEKFIMIKGNDRFDTLYKALDFINR
General information:
TITO was launched using:
RESULT:
Template:
4CU5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -78914 for 432 contacts (-182.7/contact) +
2D Compatibility (PS) -6860 + (NN) -1967 + (LL) 328
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -92513.0 ( -214.15 by residue)
QMean score : 0.388
(partial model without unconserved sides chains):
PDB file :
Tito_4CU5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CU5-query.scw
PDB file :
Tito_Scwrl_4CU5.pdb
: