Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--------MEQIDKQKIADAVKVILEAVGENPDREGLIDTPMRVARMYEE-VFAGLKKDPS--VHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAGLSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPGTKTITSAVRGAFKNDDKLRSEVLALIKHN
1FB1 Chain:A ((1-196))
GERPRSEEDNELNLPNLAAAYSSILSSLGENPQRQGLLKTPWRAASAMQ-FFTKGYQETISDVLN-DAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGKVHIGYLP-NKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALRPAGVGVVVEATHMCMVMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIRS-
General information:
TITO was launched using:
RESULT:
Template:
1FB1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92085 for 1369 contacts (-67.3/contact) +
2D Compatibility (PS) -20415 + (NN) -9997 + (LL) 276
1D Compatibility (HY) -18400 + (ID) 4550
Total energy: -145171.0 ( -106.04 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_1FB1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FB1-query.scw
PDB file :
Tito_Scwrl_1FB1.pdb
: