Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTASAPDGRPGQPEATNRRSQLKSDRRFQLLAAAERLFAERGFLAVRLEDIGAAAGVSGPAIYRHFPN-KESLLVELLVGVSARLLAGARDVTTRSANLAAALDGLIEFHLDFALGEAD----LIRIQDRDLAHLPAVAERQVRKAQRQYVEVWVGVLRELNPGLAEADARLMAHAVFGLLNSTPHSMKAADSKPARTVRARAVLRAMTVAALSAADRCL
1SGM Chain:A ((5-188))
-----------------------GDSREKILHTASRLSQLQGYHATGLNQIVKESGAPKGSLYHFFPNGKEELAIEAVTYTGKIVEHLIQQSMDESSDPVEAIQLFIKKTASQFDNTESIKGIPVGLLASETALISEPLRTVCMKVFKSWEAVFARKLME--NGFAEEEANQLGTLINSMIEGGIMLSLTNKDKTPLLLIAEQIPVLVR-----------
General information:
TITO was launched using:
RESULT:
Template:
1SGM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99628 for 1362 contacts (-73.1/contact) +
2D Compatibility (PS) -19664 + (NN) -13256 + (LL) 1920
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -134678.0 ( -98.88 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_1SGM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SGM-query.scw
PDB file :
Tito_Scwrl_1SGM.pdb
: