Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAADEPKPKKLKVEAPEALSENV-LFGMGNPLLDISAVVDKDFLDKYSLKPNDQILAEDKHKELFDELVKKFKVEYHAGGSTQNSMKVAQWMIQEPHRAATFFGCIGIDKFGEILKSKAADAHVDAHYYEQNEQPTGTCAACITGGNRSLVANLAAANCYKKEKHLDLENNWM-LVEKARVYYIAGFFLTVSPESVLKVARYA-AENNRTFTLNLSAPFISQFFKEALMEVMPYVDILFGNETEAATFAREQGF--ETKDIKEIARKTQALPKV-----------NSKRQRTVIFTQGRDDTIVA--TGNDVTAFPVLDQNQ---EEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH |
| 2AB8 Chain:A ((30-373)) | --------------------TGPMRVFAIGNPILDLVAEVPSSFLDEFFLKRGDATLATPEQMRIYSTL-DQFNPTSLPGGSALNSVRVVQKLLRKPGSAG-YMGAIGDDPRGQVLKELCDKEGLATRFMVAPGQSTGVCAVLINEKERTLCTHLGACGSFR------LPEDWTTFASGALIFYATAYTLTATPKNALEVAGYAHGIPNAIFTLNLSAPFCVELYKDAMQSLLLHTNILFGNEEEFAHLAKVHNLVAAEKTALSTANKEHAVEVCTGALRLLTAGQNTSATKLVVMTRGHNPVIAAEQTADGTVVVHEVGVPVVAAEKIVDTNGAGDAFVGGFLYALSQGKTVKQCIMCGNACAQDVIQHVG---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191476 for 2802 contacts (-68.3/contact) +
2D Compatibility (PS) -34045 + (NN) -5168 + (LL) 2392
1D Compatibility (HY) -22400 + (ID) 5650
Total energy: -256347.0 ( -91.49 by residue)
QMean score : 0.565
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