Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPECARAAGDAPLRSLEQANRTRFPFFSDVKGDHRLVLAAVETTVLVLIFAVSLLGNVCALVLVARRRRRGATACLVLNLFCADLLFI-SAIPLVLAVRWTEAWLLGPVACHLLFYVMTLSGSVTILTLAAVSLERMVCIVHLQRGVRGPGRRARAVLLALIWGYS-AVAALPLCVFFRVVPQRLPGADQEISICTLIWPTIPGEISWDVSFV----TLNFLVPGLVIVISYSKILQTSEHLLDARAVVTHSEITKASRKRLTVSLAYSESHQIRVSQQDFRLFRTLFLLMVSFFIMWSPIIITILLILIQNFKQDLVIWPSLFFWVVAFTFANSAL-NPILYNM--TLCRNEWKKIFCCFWFPEKGAILTDTSVKRNDLSIISG |
| 2I36 Chain:A ((39-326)) | -------------------------------------MLAAYMFLLIMLGFPINFL---TLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRF-GENHAIMGVAFTWVMALACAAPPLVGWSRYIPEGMQCS------CGIDYYT-PHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVK---EAAAQQQESATTQKAEKEVT---------------------RMVIIMVIAFLICWLPYAGVAFYI----FTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281320 for 2111 contacts (-133.3/contact) +
2D Compatibility (PS) -28615 + (NN) -10432 + (LL) 6176
1D Compatibility (HY) -28400 + (ID) 3850
Total energy: -346441.0 ( -164.11 by residue)
QMean score : 0.202
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