Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPANYTCTRPDGDNTDFRYFIYAVTYTVILVPGLIGNILALWVFYGYMKETKRAVIFMINLAIADLLQVLSLPLRIFYYLNHDW-PFGPGLCMFCFYLKYVNMYASIYFLVCISVRRFWFLMYP---FRFHDCKQKYDLYISIAGWLIICLACVLFPLLRTSD-DTSGNRTKCFVD--LPTRNVNLAQSVVMMTIGELIGFVTPLLIVLYCTWKTVLSLQDKYPMAQDLGEKQKALK----MILTCAGVFLICFAPYHFSFPLDFLVKSNEIKSCLARRVILIFHSVALCLASLNSCLDPVIYYFSTNEFRRRL------SRQDLHDSIQLHAKSFVSNHTASTMTPELC |
| 3CAP Chain:A ((55-326)) | ------------------------------------NFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHA----IMGVAFTWVMALACAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFV---VHFIIPLIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP--------IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKN--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CAP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -218312 for 1865 contacts (-117.1/contact) +
2D Compatibility (PS) -26052 + (NN) -6858 + (LL) 5072
1D Compatibility (HY) -22400 + (ID) 3300
Total energy: -271850.0 ( -145.76 by residue)
QMean score : 0.283
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