Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLINSTDYLINASTLVRNSTQFLAPASKMIIALSLYISSIIGTITNGLYL---WVLRFKMKQTVNTLLFFHLILSYFISTM-ILPFMATSQLQDNHWNFGTALCKVFNGTLSLGMFTSVFFLSAIGLDRYLLTLHPVWSQQHRTPRWASSIVLGVWISAAALS-IPYLI--FRETHHDRKGKVTCQNNYAVSTNWESKEMQASRQWIHVACFISRFLLGFLLPFFIIIFCYERVASKVK----ERSLFKSSKPFKVMMTAIISFFVCWMPYHIHQGLLLTTNQSLLLELTLILTVLTTSFNTIFSPTLYLFVGENFKKVFKKSILALFESTFSEDSSVERTQT |
| 4QKX Chain:A ((182-447)) | ------------------------------VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAACILTKT-WTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHWYRATHQE---AINC---YAEETCCDFFTNQAYA--------IASSIVSFYVPLVIMVFVYSRVFQEAKRQLQ-KFALKEHKALKTLGIIMGTFTLCWLPFFI-VNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCRSPDFRIAFQELLCL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QKX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203741 for 1840 contacts (-110.7/contact) +
2D Compatibility (PS) -25067 + (NN) 1473 + (LL) 5100
1D Compatibility (HY) -24400 + (ID) 3450
Total energy: -250085.0 ( -135.92 by residue)
QMean score : 0.275
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