Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMEPREAGQHVGAANGAQEDVAFNLIILSLTEGLGLGGLLGNGAVLWLLSS-NVYRNPFAIYLLDVACADLIFLGCH-MVAIVPDLLQGRLDF-PGFVQ-TSLATLRFFCYIVGLSLLAAVSVEQCLAALFPAWYSCRRPRHLTTCVCALTWALCLLLHLLLSGACTQFFGEPSRHLCRT--------------LWLVAAVLLALLCCTMCGASLMLLLRVERGPQ-----------RPPPRGFPGLILLTVLLFLFCGLPFGIYWLSRNLLW-----YIPHYFYHFSFLMAAVHCAAKPVVYFCLGSAQGRRLPLRLVLQRALGDEAELGAVRETSRRGLVDIAA |
| 2KS9 Chain:A ((32-326)) | -----------------------IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV---HNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPRL--SATATKVVICVIWVLALLLAFPQGYYSTTET-MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDSSDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRF--RLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -260932 for 2002 contacts (-130.3/contact) +
2D Compatibility (PS) -27133 + (NN) -13702 + (LL) 1616
1D Compatibility (HY) -22800 + (ID) 2300
Total energy: -325251.0 ( -162.46 by residue)
QMean score : 0.264
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