Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEGINKTAKMQFFFRPFSPDPEVQMLIFVVFLMMYLTSLGGNATIAVIVQINHSLHTPMYFFLANLAVLEIFYTSSITPLALANLLSMGKTPVSITGCGTQMFFFVFLGGADCVLLVVMAYDQFIAICHPL-RYRLIMSWSLCVELLVGSLVLGFLLSLPLTILIFHLPFCHNDEIYHFYCDMPAVMRLACA------DTRVHKTALYIISFIV-LSIPLSLISISYVFIVVAILRIRSAEGRQQAYSTCSS--------------HILVVLLQY-GCTSFIYLSPSSSYSPEMGRVVSVAYTFITPILNPLIYSLRNKELKDALRKALRKF |
| 3PQR Chain:A ((58-321)) | -------------------------------------------TLYVTVQ-HKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLH-GYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAI--------MGVAFTWVMALA--------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLV---FTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGP-IFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3PQR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -210435 for 1734 contacts (-121.4/contact) +
2D Compatibility (PS) -24416 + (NN) -1621 + (LL) 6132
1D Compatibility (HY) -24400 + (ID) 3100
Total energy: -257840.0 ( -148.70 by residue)
QMean score : 0.167
|
|
|