Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMESNQTWITEVILLGFQVDPALELFLFGFFLLFYSLTLMGNGIILGLIYLDSRLHTPMYVFLSHLAIVDMSYA-SSTVPKMLANLVMHKKVISFAPCILQTFLYLAFAITECLILVMMCYDRYVAICHPLQYTLIMNWRVCTVLASTCWIFSFLLALVHITLILRLPFCGPQKINHFFCQIMSVFKLACADTRLNQVVLFAGSAFILVGPLCLVLVSYLHILVAI-----------LRIQSGEGRR-KAFSTCSSHLCVVGLFFGSAIVMYMAPKS-----------SHSQERRKILSLFYSLFNPILNPLIYSLRNAEVKGALKRVLWKQRSM
3AYM Chain:A ((65-330))-----------------------------------------------------LQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFG------WGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFF---GPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTC


General information:
TITO was launched using:
RESULT:

Template: 3AYM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -185035 for 1799 contacts (-102.9/contact) +
2D Compatibility (PS) -24279 + (NN) -2294 + (LL) 5840
1D Compatibility (HY) -21200 + (ID) 2700
Total energy: -229668.0 ( -127.66 by residue)
QMean score : 0.193

(partial model without unconserved sides chains):
PDB file : Tito_3AYM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AYM-query.scw
PDB file : Tito_Scwrl_3AYM.pdb: