Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MVNQSSTPGFLLLGFSEHPGLERTLFVVVLTSYLLTLVG---NTLIILLSALDPKLHSPMYFFLSNLSFLDL-----CFTTSCVPQML-VNLWGPKKTISFLDCSVQIFIFLSLGTTECILLTVMAFDRYVAVCQPLHYATIIHPRLCWQLASVAWVIGLVESVVQTPSTLHLPFCPDRQVDDFVCEVPALIRLSC-------EDTSYNEIQVAVASVFILVVPLSLILVSYGAITWAVLRINSAKGRRKAFGTCSSHLTVVTLFYSSVIAVYLQPKNPYA-------QERGKFFG-------LFYAVGTPSLNPLIYTLRNKEVTRAFRRLLGKEMGLTQS |
2I35 Chain:A ((45-312)) | --------------------------------FLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPT------GCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVA-FTWVMALA--------------CAAPPLVGWSRYIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQL---VFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNDDE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163685 for 1756 contacts (-93.2/contact) +
2D Compatibility (PS) -23704 + (NN) 1176 + (LL) 4088
1D Compatibility (HY) -23200 + (ID) 3350
Total energy: -208675.0 ( -118.84 by residue)
QMean score : 0.221
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